Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929191.1_cds_XP_016476566.1_68383
CDS Infomation

[gene=LOC107798119] [db_xref=GeneID:107798119] [protein=heparanase-like protein 2] [protein_id=XP_016476566.1] [location=join(7742..7954,8065..8101,8868..9051,9766..9920,10001..10234,10442..10631,10725..10850,10940..11039,11131..11442)] [gbkey=CDS]
Sequence

ATGGATTCAAGAACTAGGTTGTTTTGTTTGGTTCTTTTAGTGTCGTCTTGTTTTTGTTTG
TCTAATTCAGATGAATTAAAGGTGATAGTAAAAGGAGTGACATCTATAGCTAAAACAGAT
GATAATTTCATATGTGCAACTTTAGATTGGTGGCCAGAAAACAAGTGTGATTATAATCAA
TGTCCATGGGGAAAAGCTGGTATCCTTAATCTGGACTTGAAAAACAAGATTCTTACAAAC
GCCGTTAAAGCATTCAATCCACTAAGAATCAGAATAGGAGGTTCACTACAAGATCAGGTT
TACTACAAAGTTGGAAAATTCCCAAAGCAATGCTCAAACTTAGAGAAAAAATCAGATGGC
CTCTTTGGATTTGCTGAAGGATGTCTCCACATGAATAGATGGGATGAATTGCATGATTTA
TTTAACAAAACAGGGGCTGCATTAACATTTTCATTGAATGCCTTACTTGGAAGGATACAA
TCAGATGAAGATGATACTCTTTGGGAAGGAGATTGGAATCAGTTTAATGCAAAATCATTA
ATGAAATACACTATTAGAAAAGGATACAAGATTGACTCATATGAATTAGGTAATGAGCTT
TGTGCAGGAGGGGTTGCTGCAAAAATAAGGCCTCAACAATATGGCAAAGATGTCAAGAAA
TTAAAGAAACTTATAACACATATGTACCCTGACCCTGCTACTAGACCAAAAATCTTGGCC
CCTGGTGGATTTTATGATGAAGAATGGTTCAAAGTCTTCCTTCAAACTACCGGTCCAGAC
GTCATAGACGGATTGACACATCATATTTACAATCTTGGAGCAGGTGTTGATCCAACTTTG
ATTGACAAACTTCAGGATCCAATTTACCTTAGTCAAGTAGCTCAAACATTTAATGATGTT
TTAAATACTGCTAAATTGTTTTCACCATCTTCTGGACCTTGGGTTGGTGAATCTGGTGGA
GCATATAATAGTGGTGGCAAAACCACTTCACATACCTTCGTCAACGGCTTCTGGTATTTG
GATCAACTCGGAATGACATCAACTTTCAACCATAAGGTATACTGCAGACAATCCTTAATT
GGTGGAAACTATGGTCTTCTCAACACTACAAGTTTCATCCCAAATCCAGATTACTATGGT
GCTCTTTTGTGGCATAAGCTGATGGGAAAGAATGTGCTTTCTACTACTCATGAGGGCTCT
CCTTACTTGCGAACCTATGCTCATTGCTCAAAGTCAAGTGGTGTTACAGTTCTACTGATT
AACATGGACAAGTCGACAACATTTGAAGTATCTGTGGTAGATGACTTGAACATGTATCCT
AGTAGGATTGAGCCTATACATCAAAGGGAAGAGTACCATTTGACACCAAAAGATGGCAAC
ATCCAAAGTGATGTTTTGTTGCTAAATGGCACTCCATTGAAGCTCACTGCCTCATTCGAC
ATCCCAGAAATGAATCCTCAGCTCGTTGATCCAACGTTGCCTATCTCCGTTGCTCCACGT
TCTATCGTCTTTGCCACCTTGAGAGGGTTCCAAGCTCCTGCTTGTGCATAG

Peptide Sequence

PEP ID

XP_016476566.1
PEP Infomation

PREDICTED: heparanase-like protein 2 [Nicotiana tabacum]
Sequence

MDSRTRLFCLVLLVSSCFCLSNSDELKVIVKGVTSIAKTDDNFICATLDWWPENKCDYNQ
CPWGKAGILNLDLKNKILTNAVKAFNPLRIRIGGSLQDQVYYKVGKFPKQCSNLEKKSDG
LFGFAEGCLHMNRWDELHDLFNKTGAALTFSLNALLGRIQSDEDDTLWEGDWNQFNAKSL
MKYTIRKGYKIDSYELGNELCAGGVAAKIRPQQYGKDVKKLKKLITHMYPDPATRPKILA
PGGFYDEEWFKVFLQTTGPDVIDGLTHHIYNLGAGVDPTLIDKLQDPIYLSQVAQTFNDV
LNTAKLFSPSSGPWVGESGGAYNSGGKTTSHTFVNGFWYLDQLGMTSTFNHKVYCRQSLI
GGNYGLLNTTSFIPNPDYYGALLWHKLMGKNVLSTTHEGSPYLRTYAHCSKSSGVTVLLI
NMDKSTTFEVSVVDDLNMYPSRIEPIHQREEYHLTPKDGNIQSDVLLLNGTPLKLTASFD
IPEMNPQLVDPTLPISVAPRSIVFATLRGFQAPACA

Transcript Sequence

Gene sequence data has not been registered.